Add comprehensive metric extraction logic for benchmark output parsing:
- Add RawTimingMetrics struct with fields for wall time, CPU time, file counts, and throughput
- Implement extract_raw_timing_metrics() to parse stdout/stderr for timing information
- Add extract_time_value() helper to parse CPU time from text formats
- Update run_benchmark() to use extraction logic instead of simple parsing
- Calculate throughput metrics (files/sec, MB/s) from extracted data
Closes bf-5b8mk. Verification: notes/bf-5b8mk.md, commit $(git rev-parse --short HEAD).
- Add READ_TIMEOUT (5 min) and MAX_OUTPUT_SIZE (100 MB) constants
- Implement read_pipe_with_timeout() with watchdog thread protection
- Update execute_grep_command() to capture and return both streams
- Prevents TH-03 hang scenario by bounding both time and memory
Acceptance criteria:
✓ Stdout captured completely
✓ Stderr captured completely
✓ Output buffered without truncation (100 MB limit)
✓ Read operations have timeout protection (5 min timeout)
✓ Both streams captured even if one is empty
Verification: notes/bf-3wkpz.md
Added typed config struct for unmapped glyph names configuration:
- unmapped_glyph_names: Vec<String> - list of glyph names to skip
- description: Option<String> - optional documentation
- version: Option<String> - format version identifier
The struct represents the JSON structure from build/unmapped-glyph-names.json
and is ready for parsing implementation in follow-up beads.
Closes bf-3vo80. Verification: notes/bf-3vo80.md
- Add std::process::Stdio to imports in both test files
- Update code to use imported Stdio instead of fully qualified paths
- Verify compilation succeeds with cargo check
Closes bf-3x4rp. Verification: notes/bf-3x4rp.md
Phase 7.7.3: Add threads field to ExtractionResult with ThreadJson schema integration.
Changes:
- Added ThreadJson and BeadJson structs to schema/mod.rs
- Added thread_to_json() function to threads/mod.rs
- Added build_page_ref_to_index() helper to parser/pages.rs
- Added threads field to ExtractionResult in extract.rs
- Implemented Phase 7.7 extraction logic with discover_threads/walk_beads
- Added threads_to_markdown() and collapse_page_ranges() to markdown.rs
- Updated JSON schema with ThreadJson and BeadJson definitions
- Added thread_to_py() and bead_to_py() conversions in pdftract-py
- Exported ThreadJson, BeadJson from lib.rs
All 32 threads module tests pass. All 35 markdown tests pass.
Verification: notes/pdftract-3h9xo.md
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Add Cargo bench target for grep performance measurement across 1000-PDF corpus.
Includes result structure, CI gate validation (50 MB/s), smart corpus path
resolution, and development-friendly empty-corpus handling.
Corpus infrastructure created at tests/fixtures/grep-corpus/ with regenerate
script, manifest template, and documentation. Benchmark ready to wire to
actual grep implementation once 7.8.3-7.8.8 sub-tasks complete.
Closes: pdftract-5bzpg
Files:
- crates/pdftract-cli/Cargo.toml: Add [[bench]] grep_1000 + chrono, criterion deps
- crates/pdftract-cli/benches/grep_1000.rs: Benchmark implementation (280 lines)
- tests/fixtures/grep-corpus/: Corpus infrastructure (regenerate.sh, manifest, README)
- notes/pdftract-5bzpg.md: Verification note with acceptance criteria status
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
